1. Analytic Step Context

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1. Analytic Step Context

1

1. Analytic Step Context

1

2. Cluster Validation

Quality control

- Summary tables

- Distribution analyses

- Inter-cluster coherence verification

- PCA dimensional reduction

3. Differential Analysis

Diffyct1 methods in few clicks

differential discovery in high-dimensional cytometry via high-resolution clustering

- Differential analysis tables are store in HTML, downloadable through reports

- Multiple statistical testing

- Automatic p-value annotations

- Consensus graphics

- Easy adjust parameter through app

4. 2025 News in Analycyte

- Phantasus format export1

- Dynamic intensity scale modifications

- Advanced filtering2

5. Availability

Presented in Marseille and Toulouse. Shared via French Bioinformatics Cloud Infrastructure1 (IFB)

Online documentation with Video tutorials2

analycyte book

6. See Also - i-cyto FRQ

FlowRepository1 Public Data Interrogation2

Conclusion

  • Generate reports of:
    • Quality control
    • Differential analysis
  • Quickly answer a scientific question
  • Speed up analysis of final cytometry data:
    • Before diving into the data
    • For end-users and core facilities

“Analycyte Book”
Analycyte Book

“Flowrepository Query”
Flowrepository Query

Ready for you to test it!